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M. Fatih Toy
Principle Investigator
Current Research Areas
Optical Computing, Biomedical Engineering, bioPhotonic, Biomedical Optics,
Electrical and Electronics Engineering, Electronic, Optics and Photonics, MEMS, Optoelectronic Materials
and Devices, Physics, Electromagnetism, Acoustics, Heat Transfer, Classical Mechanics and Fluid Dynamics,
Optics, Engineering and Technology
Projects
- High Resolution Total Internal Reflection Holographic Microscopy for the Investigation of Cellular Interfaces
- Dual Mode and Multi Wavelength 3D Quantitative Phase and Fluorescence Microscopy
- Center for Novel Microscopy Technologies
- High Resolution Optical Spectrometer with Broad Free Spectral Range
- Holographic Micro-Factory
- Digital Holographic Microscopy System with Integrated Incubator
- Projection Vein Finder
- Epifluorescence Microscopy on a Student Microscope
Publications
Journals
- O. Ferhanoglu, M. F. Toy, and H. Urey, "Two-wavelength grating interferometry for MEMS sensors," Photonics Technology Letters, IEEE, 19 (23), 1895-1897 (2007).
- M. F. Toy, O. Ferhanoglu, H. Torun, and H. Urey, "Uncooled infrared thermo-mechanical detector array: Design, fabrication and testing," Sensors and Actuators A: Physical, 156 (1), 88-94 (2009).
- Y. Cotte, M. F. Toy, E. Shaffer, N. Pavillon, and C. Depeursinge, "Sub-Rayleigh resolution by phase imaging," Optics Letters, 35 (13), 2176-2178 (2010).
- C. Pache, J. Kühn, K. Westphal, M. F. Toy, J. Parent, O. Büchi, A. Franco-Obregón, C. Depeursinge, and M. Egli, "Digital holographic microscopy real-time monitoring of cytoarchitectural alterations during simulated microgravity," Journal of Biomedical Optics, 15, 026021 (2010).
- Y. Cotte, M. F. Toy, N. Pavillon, and C. Depeursinge, "Microscopy image resolution improvement by deconvolution of complex fields," Optics Express, 18 (19), 19462-19478 (2010).
- Y. Cotte, M. F. Toy, and C. Depeursinge, "Beyond the lateral resolution limit by phase imaging," Journal of Biomedical Optics, 16, 106007 (2011).
- O. Ferhanoglu, M.F. Toy, and H. Urey, "Fourier optics analysis of grating sensors with tilt errors," Optics Letters, 36(12), 2254-2256 (2011).
- Y. Cotte, M. F. Toy, C. Arfire, S. S. Kou, D. Boss, I. Bergoënd, and C. Depeursinge, "Realistic 3D coherent transfer function inverse filtering of complex fields," Biomedical Optics Express, 2 (8), 2216 (2011).
- M. F. Toy, S. Richard, J. Kühn, A. Franco-Obregón, M. Egli, and C. Depeursinge, "Enhanced robustness digital holographic microscopy for demanding environment of space biology," Biomedical Optics Express, 3 (2), 313-326 (2012).
- M. F. Toy, J. Kühn, S. Richard, J. Parent, M. Egli, and C. Depeursinge, "Accelerated autofocusing of off-axis holograms using critical sampling," Opt. Lett., 37 (24), 5094-5096 (2012).
- Y. Cotte, F. Toy, P. Jourdain, N. Pavillon, D. Boss, P. Magistretti, P. Marquet, and C. Depeursinge, "Marker-free phase nanoscopy," Nature Photonics, 7 (2), 113-117 (2013).
- A. Hong, B. Zeydan, S. Charreyron, O. Ergeneman, S. Pane, M. Toy, A. Petruska, and B. Nelson, "Real-Time Holographic Tracking and Control of Microrobots," IEEE RA-L, 2 (1), 143-148 (2017).
- Ş. K. Çetindağ, M. F. Toy, O. Ferhanoğlu, F. Çivitci, "A Speckle-Enhanced Prism Spectrometer with High Dynamic Range," IEEE Photonics Technology Letters, 30 (24), 2139-2142 (2018).
Conferences
- J. Ollila, M. F. Toy, O. Ferhanoglu, P. Karioja, and H. Urey, "Vacuum package design for a MEMS based IR detector array," Proceedings of the European Microelectronics and Packaging Conference (Oulu, 2007).
- M. F. Toy, O. Ferhanoglu, and H. Urey, "Two-wavelength Grating Interferometry for Extended Range MEMS Metrology," IEEE/LEOS International Conference on Optical MEMS and Nanophotonics, 95 (Hualien, 2007).
- O. Ferhanoglu, M. F. Toy, G. Unal, H. Kalyoncu, G. Kabuli, A. U. Caliskan, and H. Urey, "Thermal-mechanical Detector Array with Integrated Diffraction Grating," The 20th Annual Meeting of the IEEE Lasers and Electro-Optics Society, 836 (Orlando, October 21-25, 2007).
- M. F. Toy, O. Ferhanoglu, H. Torun, F. L. Degertekin, and H. Urey, "MOEMS thermal imaging camera," Ph. D. Research in Microelectronics and Electronics (Istanbul, 2008).
- O. Ferhanoglu, M. F. Toy, and H. Urey, "Parylene-based uncooled thermomechanical array," Proc. SPIE 7298, Infrared Technology and Applications XXXV, 72980H (Orlando, May 06, 2009).
- Y. Cotte, M. F. Toy, N. Pavillon, and C. Depeursinge, "Studies on synthetic deconvolution of complex fields with digital holographic microscopy," Focus on Microscopy (Shanghai, 2010).
- M. F. Toy, C. Pache, J. Parent, J. Kühn, M. Egli, and C. Depeursinge, "Dual-mode digital holographic and fluorescence microscopy for the study of morphological changes in cells under simulated microgravity," Proc. SPIE 7570, Three-Dimensional and Multidimensional Microscopy: Image Acquisition and Processing XVII, 75700A (San Francisco, February 24, 2010).
- M. Toy, J. Kühn, J. Parent, C. Pache, M. Egli, and C. Depeursinge, "Real Time 3-D Cytomorphological Imaging Using Digital Holographic Microscopy and Fluorescence Microscopy for Space Biology," in Biomedical Optics and 3-D Imaging, OSA Technical Digest (CD), DTuA5 (Miami, 2010).
- Y. Cotte, F. Toy, D. Boss, and C. Depeursinge, "Deconvolved phase imaging for diffraction tomography," Frontiers in Optics 2011/Laser Science XXVII, OSA Technical Digest, PDPA2 (San Jose, 2011).
- Y. Cotte, F. Toy, I. Bergoend, C. Arfire, S.S. Kou, and C. Depeursinge, "Applications of complex field deconvolution using digital holographic microscopy," Focus on Microscopy (Konstanz, 2011).
- C. Depeursinge, Y. Cotte, M. F. Toy, and S. S. Kou, "Dealing with reconstructed complex fields in microscopy: Going to the resolution limit and beyond?," Focus on Microscopy (Singapore, 2012).
- M. F. Toy, S. Richard, J. Kühn, A. Franco-Obregón, M. Egli, and C. Depeursinge, "Digital holographic microscopy for the cytomorphological imaging of cells under zero gravity," Proc. SPIE 8227, Three-Dimensional and Multidimensional Microscopy: Image Acquisition and Processing XIX, 82270S (San Francisco, February 9, 2012).
- C. Depeursinge, Y. Cotte, F. Toy, P. Jourdain, D. Boss, P. Marquet, and P. Magistretti, "Super-resolution Phase Tomography," Digital Holography and Three-Dimensional Imaging, OSA Technical Digest (online), DTh1A.2 (Hawaii, 2013).